Dear @Tony_Duke,
You just need to change FileLeafRef property, for example, like this:
...
var newName = "HelloWorld";
var list = pnp.sp.web.lists.getByTitle("Documents2");
list.items.getById(uploadedItemId).update({
...
FileLeafRef: newName
}).then(function(){
console.log("Updated!");
fd.control('SPDataTable1').refresh();
})
P.S. Be careful with folders, as it also contains path to file.